从侵入性冠状动脉造影(ICA)中准确提取冠状动脉(ICA)在临床决策中对于冠状动脉疾病的诊断和风险分层(CAD)很重要。在这项研究中,我们开发了一种使用深度学习来自动提取冠状动脉腔的方法。方法。提出了一个深度学习模型U-NET 3+,其中包含了全面的跳过连接和深度监督,以自动从ICAS中自动提取冠状动脉。在这个新型的冠状动脉提取框架中采用了转移学习和混合损失功能。结果。使用了一个包含从210名患者获得的616个ICA的数据集。在技​​术评估中,U-NET 3+的骰子得分为0.8942,灵敏度为0.8735,高于U-NET ++(骰子得分:0.8814:0.8814,灵敏度为0.8331)和U-net(骰子分数) :0.8799,灵敏度为0.8305)。结论。我们的研究表明,U-NET 3+优于其他分割框架,用于自动从ICA中提取冠状动脉。该结果表明了临床使用的巨大希望。
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现在,我们目睹了深度学习方法在各种蛋白质(或数据集)中的重大进展。但是,缺乏评估不同方法的性能的标准基准,这阻碍了该领域的深度学习进步。在本文中,我们提出了一种称为PEER的基准,这是一种用于蛋白质序列理解的全面和多任务基准。 PEER提供了一组不同的蛋白质理解任务,包括蛋白质功能预测,蛋白质定位预测,蛋白质结构预测,蛋白质 - 蛋白质相互作用预测和蛋白质 - 配体相互作用预测。我们评估每个任务的不同类型的基于序列的方法,包括传统的特征工程方法,不同的序列编码方法以及大规模的预训练蛋白质语言模型。此外,我们还研究了这些方法在多任务学习设置下的性能。实验结果表明,大规模的预训练蛋白质语言模型可实现大多数单个任务的最佳性能,共同训练多个任务进一步提高了性能。该基准的数据集和源代码均可在https://github.com/deepgraphlearning/peer_benchmark上获得
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近年来,目睹了直接建立在点云上的学识渊博的代表。尽管变得越来越表现力,但大多数现有的表示仍然很难产生有序的点集。受到球形多视图扫描仪的启发,我们提出了一种称为Spotlights的新型采样模型,代表3D形状作为深度值的紧凑型1D阵列。它模拟了均匀分布在球体上的摄像机的配置,在该球体上,每个虚拟摄像机都会通过小同心球形盖上的样品点从主要点施放光线,以探测可能与球体包围的物体的相交。因此,结构化点云被隐式地作为深度的函数。我们提供了该新样本方案的详细几何分析,并在点云完成任务的背景下证明了其有效性。合成数据和真实数据的实验结果表明,我们的方法可以达到竞争精度和一致性,同时显着降低了计算成本。此外,我们在下游点云注册任务上显示出优于最新完成方法的性能。
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学习有效的蛋白质表示在生物学的各种任务中至关重要,例如预测蛋白质功能或结构。现有的方法通常在大量未标记的氨基酸序列上预先蛋白质语言模型,然后在下游任务中使用一些标记的数据来对模型进行修复。尽管基于序列的方法具有有效性,但尚未探索蛋白质性能预测的已知蛋白质结构的预处理功能,尽管蛋白质结构已知是蛋白质功能的决定因素,但尚未探索。在本文中,我们建议根据其3D结构预处理蛋白质。我们首先提出一个简单而有效的编码器,以学习蛋白质的几何特征。我们通过利用多视图对比学习和不同的自我预测任务来预先蛋白质图编码器。对功能预测和折叠分类任务的实验结果表明,我们提出的预处理方法表现优于或与最新的基于最新的序列方法相提并论,同时使用较少的数据。我们的实施可在https://github.com/deepgraphlearning/gearnet上获得。
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多源域适应(MSDA)着重于将知识从多个源域转移到目标域,这与常规的单源域适应性相比,这是一个更实用和具有挑战性的问题。在此问题中,必须共同对多个源域和目标域进行建模,并且也需要有效的域组合方案。不同领域之间的图形结构对于应对这些挑战很有用,在这些挑战中,可以有效地对各种实例/类别之间的相互依赖性进行建模。在这项工作中,我们提出了两种类型的图形模型,即MSDA(CRF-MSDA)的条件随机场和MSDA的Markov随机场(MRF-MSDA),用于跨域关节建模和可学习的域组合。简而言之,给定一个由查询样品和语义原型(即代表性类别嵌入)组成的观察集,CRF-MSDA模型旨在学习根据观测值调节标签的联合分布。我们通过在所有观察结果上构建一个关系图并进行当地消息来实现这一目标。相比之下,MRF-MSDA旨在通过基于能量的公式对观测值的联合分布进行建模,并且它可以通过求和几个特定网络的联合可能性来自然执行标签预测。与CRF-MSDA对应物相比,MRF-MSDA模型具有更高的表达性,并且具有较低的计算成本。我们在具有独特的域移位和数据复杂性的四个标准基准数据集上评估了这两个模型,并且两个模型都在所有基准测试基准上都具有优于现有方法的性能。此外,分析研究说明了不同模型成分的效果,并提供了有关跨域关节建模如何执行的见解。
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基于补丁的方法和深度网络已经采用了解决图像染色问题,具有自己的优势和劣势。基于补丁的方法能够通过从未遮盖区域搜索最近的邻居修补程序来恢复具有高质量纹理的缺失区域。但是,这些方法在恢复大缺失区域时会带来问题内容。另一方面,深度网络显示有希望的成果完成大区域。尽管如此,结果往往缺乏类似周围地区的忠诚和尖锐的细节。通过汇集两个范式中,我们提出了一种新的深度染色框架,其中纹理生成是由从未掩蔽区域提取的补丁样本的纹理记忆引导的。该框架具有一种新颖的设计,允许使用深度修复网络训练纹理存储器检索。此外,我们还介绍了贴片分配损失,以鼓励高质量的贴片合成。所提出的方法在三个具有挑战性的图像基准测试中,即地位,Celeba-HQ和巴黎街道视图数据集来说,该方法显示出质量和定量的卓越性能。
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Recent works on domain adaptation reveal the effectiveness of adversarial learning on filling the discrepancy between source and target domains. However, two common limitations exist in current adversarial-learning-based methods. First, samples from two domains alone are not sufficient to ensure domain-invariance at most part of latent space. Second, the domain discriminator involved in these methods can only judge real or fake with the guidance of hard label, while it is more reasonable to use soft scores to evaluate the generated images or features, i.e., to fully utilize the inter-domain information. In this paper, we present adversarial domain adaptation with domain mixup (DM-ADA), which guarantees domain-invariance in a more continuous latent space and guides the domain discriminator in judging samples' difference relative to source and target domains. Domain mixup is jointly conducted on pixel and feature level to improve the robustness of models. Extensive experiments prove that the proposed approach can achieve superior performance on tasks with various degrees of domain shift and data complexity.
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Traffic flow prediction is an important part of smart transportation. The goal is to predict future traffic conditions based on historical data recorded by sensors and the traffic network. As the city continues to build, parts of the transportation network will be added or modified. How to accurately predict expanding and evolving long-term streaming networks is of great significance. To this end, we propose a new simulation-based criterion that considers teaching autonomous agents to mimic sensor patterns, planning their next visit based on the sensor's profile (e.g., traffic, speed, occupancy). The data recorded by the sensor is most accurate when the agent can perfectly simulate the sensor's activity pattern. We propose to formulate the problem as a continuous reinforcement learning task, where the agent is the next flow value predictor, the action is the next time-series flow value in the sensor, and the environment state is a dynamically fused representation of the sensor and transportation network. Actions taken by the agent change the environment, which in turn forces the agent's mode to update, while the agent further explores changes in the dynamic traffic network, which helps the agent predict its next visit more accurately. Therefore, we develop a strategy in which sensors and traffic networks update each other and incorporate temporal context to quantify state representations evolving over time.
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As the basis for prehensile manipulation, it is vital to enable robots to grasp as robustly as humans. In daily manipulation, our grasping system is prompt, accurate, flexible and continuous across spatial and temporal domains. Few existing methods cover all these properties for robot grasping. In this paper, we propose a new methodology for grasp perception to enable robots these abilities. Specifically, we develop a dense supervision strategy with real perception and analytic labels in the spatial-temporal domain. Additional awareness of objects' center-of-mass is incorporated into the learning process to help improve grasping stability. Utilization of grasp correspondence across observations enables dynamic grasp tracking. Our model, AnyGrasp, can generate accurate, full-DoF, dense and temporally-smooth grasp poses efficiently, and works robustly against large depth sensing noise. Embedded with AnyGrasp, we achieve a 93.3% success rate when clearing bins with over 300 unseen objects, which is comparable with human subjects under controlled conditions. Over 900 MPPH is reported on a single-arm system. For dynamic grasping, we demonstrate catching swimming robot fish in the water.
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Weakly supervised semantic segmentation (WSSS) with image-level labels is a challenging task in computer vision. Mainstream approaches follow a multi-stage framework and suffer from high training costs. In this paper, we explore the potential of Contrastive Language-Image Pre-training models (CLIP) to localize different categories with only image-level labels and without any further training. To efficiently generate high-quality segmentation masks from CLIP, we propose a novel framework called CLIP-ES for WSSS. Our framework improves all three stages of WSSS with special designs for CLIP: 1) We introduce the softmax function into GradCAM and exploit the zero-shot ability of CLIP to suppress the confusion caused by non-target classes and backgrounds. Meanwhile, to take full advantage of CLIP, we re-explore text inputs under the WSSS setting and customize two text-driven strategies: sharpness-based prompt selection and synonym fusion. 2) To simplify the stage of CAM refinement, we propose a real-time class-aware attention-based affinity (CAA) module based on the inherent multi-head self-attention (MHSA) in CLIP-ViTs. 3) When training the final segmentation model with the masks generated by CLIP, we introduced a confidence-guided loss (CGL) to mitigate noise and focus on confident regions. Our proposed framework dramatically reduces the cost of training for WSSS and shows the capability of localizing objects in CLIP. Our CLIP-ES achieves SOTA performance on Pascal VOC 2012 and MS COCO 2014 while only taking 10% time of previous methods for the pseudo mask generation. Code is available at https://github.com/linyq2117/CLIP-ES.
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